Pangeo environment in Galaxy Earth System supported by Fair-Ease

The Earth System is a complex and dynamic system that encompasses the interactions between the atmosphere, oceans, land, and biosphere. Understanding and analyzing data from the Earth System Model (ESM) is essential, for example to predict and mitigate the impacts of climate change.

Today, collaborative efforts among scientists across diverse fields are increasingly urgent. The FAIR-EASE project aims to build an interdomain digital architecture for integrated and collaborative use of environmental data. Galaxy is a main component of this architecture which will be used by several domains of study chose by FAIR-EASE.

Galaxy, an open-source web platform, provides users with an easy and FAIR tool to access and handle multidisciplinary environmental data. By design, Galaxy manages data analyses by sharing and publishing all involved items like inputs, results, workflows, and visualisations, ensuring reproducibility by capturing the necessary information to repeat and understand data analyses.

From this point on, a Pangeo environment is a tool more than relevant to be used alongside earth-system related data and processing tools in order to create cross domain analyses. The good news is that a Pangeo environment is accessible on Galaxy. It can be exploited as a jupyterlab and allows the user to manage their NetCDF data in a Pangeo environment with the use of notebooks. Multiple tutorials are available on the Galaxy Training Network to learn how to use Pangeo.

The Galaxy Training Network significantly contributes to enhancing the accessibility and reusability of tools and workflows. The Galaxy Training platform hosts an extensive collection of tutorials. These tutorials serve as valuable resources for individuals seeking to learn how to navigate Galaxy, employ specific functionalities like Interactive Tools or how to execute workflows for specific analyses.

In synthetisis, Pangeo in Galaxy provide Pangeo users with an up-to-date data analysis platform ensuring reproducibility and mixing trainings and tools.

On the Earth System side, a first step was the creation of a Galaxy declination for Earth System studies (earth-system.usegalaxy.eu) with dedicated data, models, processing, visualisations and tutorials. It will make Earth System modeling more accessible to researchers in different fields.

In this Galaxy subdomain we choose to have the Pangeo tools. Our hope is to be able to implement cross domain workflows including climate and earth system sciences.

During this session our aim is to present how you can use the Pangeo environment from the Galaxy Earth System.